dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02361
Location and strand information: 10558 - 11112 (+)
Family: 3.A.1.29.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02362
Location and strand information: 11326 - 13029 (+)
Family: 3.A.1.29.1
Protein type: TC
Protein description: Putative HMP/thiamine import ATP-binding protein YkoD

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02363
Location and strand information: 13029 - 13859 (+)
Family: 3.A.1.29.1
Protein type: TC
Protein description: Energy-coupling factor transporter transmembrane protein EcfT

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02364
Location and strand information: 14398 - 15033 (-)
Family: HD
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02365
Location and strand information: 15276 - 16571 (+)
Family: 2.A.35.1.5
Protein type: TC
Protein description: Malate-2H(+)/Na(+)-lactate antiporter

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02366
Location and strand information: 16811 - 18757 (+)
Family: null
Protein type: null
Protein description: Elongation factor G

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02367
Location and strand information: 19120 - 20463 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02368
Location and strand information: 20467 - 21393 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02369
Location and strand information: 21404 - 22264 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02370
Location and strand information: 22383 - 23492 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.4345
Protein molecular weight: 43295.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000143_18|CGC1
Gene ID: MGYG000000143_02371
Location and strand information: 23482 - 25062 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1546
Protein molecular weight: 59021.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000143_02361	hypothetical protein	TC	10558	11112	+	3.A.1.29.1
MGYG000000143_02362	Putative HMP/thiamine import ATP-binding protein YkoD	TC	11326	13029	+	3.A.1.29.1
MGYG000000143_02363	Energy-coupling factor transporter transmembrane protein EcfT	TC	13029	13859	+	3.A.1.29.1
MGYG000000143_02364	hypothetical protein	STP	14398	15033	-	HD
MGYG000000143_02365	Malate-2H(+)/Na(+)-lactate antiporter	TC	15276	16571	+	2.A.35.1.5
MGYG000000143_02366	Elongation factor G	null	16811	18757	+	GTP_EFTU\| EFG_III\| EFG_IV\| EFG_C
MGYG000000143_02367	Putative ABC transporter substrate-binding protein YesO	STP	19120	20463	+	SBP_bac_1
MGYG000000143_02368	Lactose transport system permease protein LacF	TC	20467	21393	+	3.A.1.1.11
MGYG000000143_02369	Lactose transport system permease protein LacG	TC	21404	22264	+	3.A.1.1.11
MGYG000000143_02370	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	22383	23492	+	GH105
MGYG000000143_02371	hypothetical protein	CAZyme	23482	25062	+	GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature